Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trerf1Q8BXJ2 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Gm11543-201ENSMUST00000120758 370 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trerf1Q8BXJ2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.91□□□□□ -0.02
Trerf1Q8BXJ2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trerf1Q8BXJ2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms