Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm17150-201ENSMUST00000165577 381 ntBASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Mir7085-201ENSMUST00000184353 66 ntBASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Gm37714-201ENSMUST00000194742 342 ntBASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rd3Q8BRE0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Gm4984-201ENSMUST00000115987 360 ntBASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Gm44719-201ENSMUST00000206404 149 ntBASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Gm5035-201ENSMUST00000215581 927 ntBASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.92□□□□□ -0.02
Rd3Q8BRE0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gm27892-201ENSMUST00000185017 106 ntBASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Mir7654-201ENSMUST00000185082 70 ntBASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gm18027-201ENSMUST00000218947 619 ntBASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rd3Q8BRE0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
Rd3Q8BRE0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rd3Q8BRE0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rd3Q8BRE0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms