Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.62□□□□□ -0.55
Smco3Q8BQM7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smco3Q8BQM7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Gm15372-201ENSMUST00000120729 834 ntBASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smco3Q8BQM7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Gm12895-201ENSMUST00000122214 226 ntBASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Gm27704-201ENSMUST00000185094 107 ntBASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Gm9682-201ENSMUST00000197505 556 ntBASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Gm7787-201ENSMUST00000216858 688 ntBASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smco3Q8BQM7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.59□□□□□ -0.55
Smco3Q8BQM7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smco3Q8BQM7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms