Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.92□□□□□ -0.5
Ubr5Q80TP3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Gm8099-201ENSMUST00000200510 742 ntBASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Gm44545-201ENSMUST00000208262 746 ntBASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ubr5Q80TP3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm5781-201ENSMUST00000219792 443 ntBASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm17330-201ENSMUST00000221047 165 ntBASIC11.91□□□□□ -0.5
Ubr5Q80TP3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Snord83b-201ENSMUST00000104546 94 ntBASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm19208-201ENSMUST00000213861 912 ntBASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.91□□□□□ -0.5
Ubr5Q80TP3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Gm11628-201ENSMUST00000117568 171 ntBASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Gm43378-201ENSMUST00000199336 582 ntBASIC11.9□□□□□ -0.5
Ubr5Q80TP3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Gm12363-201ENSMUST00000122250 668 ntBASIC11.9□□□□□ -0.5
Ubr5Q80TP3 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubr5Q80TP3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Gm9550-201ENSMUST00000161130 862 ntBASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Gm3508-201ENSMUST00000186012 792 ntBASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ubr5Q80TP3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms