Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.43■□□□□ 0.06
Ush1gQ80T11 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Ush1gQ80T11 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ush1gQ80T11 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ush1gQ80T11 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ush1gQ80T11 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Gm5354-201ENSMUST00000182417 973 ntBASIC15.42■□□□□ 0.06
Ush1gQ80T11 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Gm6916-202ENSMUST00000205523 195 ntBASIC15.42■□□□□ 0.06
Ush1gQ80T11 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.42■□□□□ 0.06
Ush1gQ80T11 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.42■□□□□ 0.06
Ush1gQ80T11 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.42■□□□□ 0.06
Ush1gQ80T11 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ush1gQ80T11 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.41■□□□□ 0.06
Ush1gQ80T11 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.41■□□□□ 0.06
Ush1gQ80T11 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Gm4984-201ENSMUST00000115987 360 ntBASIC15.41■□□□□ 0.06
Ush1gQ80T11 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ush1gQ80T11 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.4■□□□□ 0.06
Ush1gQ80T11 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.4■□□□□ 0.06
Ush1gQ80T11 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.4■□□□□ 0.06
Ush1gQ80T11 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.4■□□□□ 0.06
Ush1gQ80T11 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ush1gQ80T11 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms