Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Gm45841-201ENSMUST00000207700 164 ntBASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 AC159896.2-201ENSMUST00000214753 269 ntBASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 AC154319.1-201ENSMUST00000216330 312 ntBASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 AL589735.1-201ENSMUST00000224353 270 ntBASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Snora73a-201ENSMUST00000082453 205 ntBASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd4Q6PDQ2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Gm38002-201ENSMUST00000193255 180 ntBASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Gm43179-201ENSMUST00000198797 275 ntBASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd4Q6PDQ2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.08■□□□□ 0.48
Chd4Q6PDQ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Gm15544-201ENSMUST00000118776 1531 ntBASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Gm7399-201ENSMUST00000032395 858 ntBASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chd4Q6PDQ2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm15889-202ENSMUST00000212669 2443 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm37497-201ENSMUST00000195830 798 ntBASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd4Q6PDQ2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms