Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm11618-201ENSMUST00000117946 267 ntBASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm13297-201ENSMUST00000120205 934 ntBASIC16.29■□□□□ 0.2
Scn9aQ62205 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Rps4l-202ENSMUST00000204242 789 ntBASIC16.29■□□□□ 0.2
Scn9aQ62205 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn9aQ62205 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm8227-201ENSMUST00000223306 571 ntBASIC16.29■□□□□ 0.2
Scn9aQ62205 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.29■□□□□ 0.2
Scn9aQ62205 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.29■□□□□ 0.2
Scn9aQ62205 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn9aQ62205 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn9aQ62205 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.28■□□□□ 0.2
Scn9aQ62205 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn9aQ62205 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm14381-201ENSMUST00000122105 414 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm13123-201ENSMUST00000122173 492 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm6222-202ENSMUST00000182143 629 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Scn9aQ62205 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn9aQ62205 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.28■□□□□ 0.2
Scn9aQ62205 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Scn9aQ62205 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.27■□□□□ 0.2
Scn9aQ62205 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.27■□□□□ 0.2
Scn9aQ62205 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.27■□□□□ 0.2
Scn9aQ62205 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Gm16379-201ENSMUST00000161469 348 ntBASIC16.27■□□□□ 0.2
Scn9aQ62205 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Scn9aQ62205 Gm8762-201ENSMUST00000193486 339 ntBASIC16.27■□□□□ 0.2
Scn9aQ62205 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.27■□□□□ 0.2
Scn9aQ62205 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.27■□□□□ 0.2
Scn9aQ62205 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn9aQ62205 Gm15370-201ENSMUST00000117158 253 ntBASIC16.27■□□□□ 0.19
Scn9aQ62205 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.27■□□□□ 0.19
Scn9aQ62205 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.27■□□□□ 0.19
Scn9aQ62205 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.27■□□□□ 0.19
Scn9aQ62205 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn9aQ62205 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn9aQ62205 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.27■□□□□ 0.19
Scn9aQ62205 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn9aQ62205 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.27■□□□□ 0.19
Scn9aQ62205 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn9aQ62205 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn9aQ62205 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.27■□□□□ 0.19
Scn9aQ62205 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn9aQ62205 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.27■□□□□ 0.19
Scn9aQ62205 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Scn9aQ62205 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn9aQ62205 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Scn9aQ62205 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.26■□□□□ 0.19
Scn9aQ62205 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn9aQ62205 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms