Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm43170-201ENSMUST00000199827 612 ntBASIC16.63■□□□□ 0.25
Ctr9Q62018 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.63■□□□□ 0.25
Ctr9Q62018 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.63■□□□□ 0.25
Ctr9Q62018 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.63■□□□□ 0.25
Ctr9Q62018 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.63■□□□□ 0.25
Ctr9Q62018 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ctr9Q62018 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Ctr9Q62018 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.62■□□□□ 0.25
Ctr9Q62018 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.62■□□□□ 0.25
Ctr9Q62018 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ctr9Q62018 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ctr9Q62018 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.61■□□□□ 0.25
Ctr9Q62018 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ctr9Q62018 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.61■□□□□ 0.25
Ctr9Q62018 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.61■□□□□ 0.25
Ctr9Q62018 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.61■□□□□ 0.25
Ctr9Q62018 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ctr9Q62018 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ctr9Q62018 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.6■□□□□ 0.25
Ctr9Q62018 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ctr9Q62018 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ctr9Q62018 Gm10766-202ENSMUST00000194123 606 ntBASIC16.6■□□□□ 0.25
Ctr9Q62018 Gm9797-201ENSMUST00000052902 613 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms