Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd1Q61466 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Gm28760-201ENSMUST00000185995 736 ntBASIC14.67□□□□□ -0.06
Smarcd1Q61466 Gm42612-201ENSMUST00000197986 623 ntBASIC14.67□□□□□ -0.06
Smarcd1Q61466 Gm43170-201ENSMUST00000199827 612 ntBASIC14.67□□□□□ -0.06
Smarcd1Q61466 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd1Q61466 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.66□□□□□ -0.06
Smarcd1Q61466 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.66□□□□□ -0.06
Smarcd1Q61466 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.66□□□□□ -0.06
Smarcd1Q61466 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.66□□□□□ -0.06
Smarcd1Q61466 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.66□□□□□ -0.06
Smarcd1Q61466 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.66□□□□□ -0.06
Smarcd1Q61466 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd1Q61466 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd1Q61466 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms