Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.25■□□□□ 0.51
Ccne1Q61457 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccne1Q61457 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.25■□□□□ 0.51
Ccne1Q61457 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccne1Q61457 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Mir6420-201ENSMUST00000185032 102 ntBASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.25■□□□□ 0.51
Ccne1Q61457 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.25■□□□□ 0.51
Ccne1Q61457 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ccne1Q61457 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccne1Q61457 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccne1Q61457 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccne1Q61457 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccne1Q61457 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccne1Q61457 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.24■□□□□ 0.51
Ccne1Q61457 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccne1Q61457 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccne1Q61457 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccne1Q61457 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccne1Q61457 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccne1Q61457 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Ccne1Q61457 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccne1Q61457 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccne1Q61457 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccne1Q61457 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccne1Q61457 Gm14660-201ENSMUST00000119809 575 ntBASIC18.23■□□□□ 0.51
Ccne1Q61457 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.23■□□□□ 0.51
Ccne1Q61457 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccne1Q61457 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccne1Q61457 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccne1Q61457 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccne1Q61457 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccne1Q61457 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm27847-201ENSMUST00000183711 107 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm27375-201ENSMUST00000183799 107 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm45784-201ENSMUST00000188360 142 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm10012-201ENSMUST00000078252 192 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccne1Q61457 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccne1Q61457 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccne1Q61457 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.22■□□□□ 0.51
Ccne1Q61457 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccne1Q61457 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms