Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.92■□□□□ 0.3
Mre11Q61216 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.92■□□□□ 0.3
Mre11Q61216 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Mre11Q61216 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Mre11Q61216 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mre11Q61216 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gm14859-201ENSMUST00000117752 357 ntBASIC16.91■□□□□ 0.3
Mre11Q61216 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gm27704-201ENSMUST00000185094 107 ntBASIC16.91■□□□□ 0.3
Mre11Q61216 Gm9682-201ENSMUST00000197505 556 ntBASIC16.91■□□□□ 0.3
Mre11Q61216 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.91■□□□□ 0.3
Mre11Q61216 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Mre11Q61216 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Mypopos-202ENSMUST00000205975 2321 ntBASIC16.91■□□□□ 0.3
Mre11Q61216 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.91■□□□□ 0.3
Mre11Q61216 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mre11Q61216 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mre11Q61216 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Mre11Q61216 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Mre11Q61216 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.9■□□□□ 0.3
Mre11Q61216 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Mre11Q61216 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Mre11Q61216 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC16.9■□□□□ 0.3
Mre11Q61216 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.9■□□□□ 0.3
Mre11Q61216 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mre11Q61216 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Mre11Q61216 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.89■□□□□ 0.29
Mre11Q61216 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.89■□□□□ 0.29
Mre11Q61216 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
Mre11Q61216 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.89■□□□□ 0.29
Mre11Q61216 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.89■□□□□ 0.29
Mre11Q61216 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Mre11Q61216 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.89■□□□□ 0.29
Mre11Q61216 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.89■□□□□ 0.29
Mre11Q61216 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.89■□□□□ 0.29
Mre11Q61216 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.89■□□□□ 0.29
Mre11Q61216 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Mre11Q61216 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.89■□□□□ 0.29
Mre11Q61216 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms