Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.45□□□□□ -0.26
Nr1h4Q60641 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.45□□□□□ -0.26
Nr1h4Q60641 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nr1h4Q60641 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gm28659-201ENSMUST00000188013 759 ntBASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gm18195-201ENSMUST00000207604 706 ntBASIC13.44□□□□□ -0.26
Nr1h4Q60641 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.44□□□□□ -0.26
Nr1h4Q60641 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nr1h4Q60641 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gm5177-201ENSMUST00000183092 997 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gm27301-201ENSMUST00000184012 127 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gm5864-201ENSMUST00000202263 970 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nr1h4Q60641 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.43□□□□□ -0.26
Nr1h4Q60641 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nr1h4Q60641 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms