Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Gm16476-201ENSMUST00000221544 139 ntBASIC14.62□□□□□ -0.07
Satb1Q60611 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.62□□□□□ -0.07
Satb1Q60611 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Satb1Q60611 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Satb1Q60611 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Satb1Q60611 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.62□□□□□ -0.07
Satb1Q60611 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.62□□□□□ -0.07
Satb1Q60611 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Satb1Q60611 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Satb1Q60611 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Satb1Q60611 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.61□□□□□ -0.07
Satb1Q60611 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.61□□□□□ -0.07
Satb1Q60611 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Satb1Q60611 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.61□□□□□ -0.07
Satb1Q60611 Snora78-201ENSMUST00000158630 128 ntBASIC14.61□□□□□ -0.07
Satb1Q60611 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm27839-201ENSMUST00000184242 106 ntBASIC14.61□□□□□ -0.07
Satb1Q60611 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm37424-201ENSMUST00000191727 561 ntBASIC14.61□□□□□ -0.07
Satb1Q60611 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.61□□□□□ -0.07
Satb1Q60611 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.61□□□□□ -0.07
Satb1Q60611 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.61□□□□□ -0.07
Satb1Q60611 Dupd1-202ENSMUST00000224735 548 ntBASIC14.61□□□□□ -0.07
Satb1Q60611 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Satb1Q60611 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Satb1Q60611 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Satb1Q60611 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Satb1Q60611 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.61□□□□□ -0.07
Satb1Q60611 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Satb1Q60611 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Satb1Q60611 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Satb1Q60611 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Satb1Q60611 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Satb1Q60611 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Satb1Q60611 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.6□□□□□ -0.07
Satb1Q60611 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Satb1Q60611 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Satb1Q60611 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Satb1Q60611 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.6□□□□□ -0.07
Satb1Q60611 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.6□□□□□ -0.07
Satb1Q60611 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.6□□□□□ -0.07
Satb1Q60611 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.6□□□□□ -0.07
Satb1Q60611 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.6□□□□□ -0.07
Satb1Q60611 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Satb1Q60611 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.6□□□□□ -0.07
Satb1Q60611 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.6□□□□□ -0.07
Satb1Q60611 Celf4-206ENSMUST00000224553 1729 ntBASIC14.6□□□□□ -0.07
Satb1Q60611 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Satb1Q60611 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Satb1Q60611 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.59□□□□□ -0.07
Satb1Q60611 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.59□□□□□ -0.07
Satb1Q60611 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Satb1Q60611 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms