Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.91■□□□□ 0.3
Vps54Q5SPW0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Gm10766-202ENSMUST00000194123 606 ntBASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps54Q5SPW0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gm42612-201ENSMUST00000197986 623 ntBASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gm43170-201ENSMUST00000199827 612 ntBASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps54Q5SPW0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps54Q5SPW0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps54Q5SPW0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.89■□□□□ 0.29
Vps54Q5SPW0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps54Q5SPW0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps54Q5SPW0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms