Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Gm18916-201ENSMUST00000198264 1246 ntBASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Gm25007-201ENSMUST00000083808 133 ntBASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim41Q5NCC3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Dctn4-202ENSMUST00000223590 1530 ntBASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Gm13385-201ENSMUST00000121089 220 ntBASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Gm38266-201ENSMUST00000194931 421 ntBASIC24.35■■□□□ 1.49
Trim41Q5NCC3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Gm38037-201ENSMUST00000192600 1624 ntBASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trim41Q5NCC3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Gm43094-201ENSMUST00000196549 921 ntBASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Gm19078-201ENSMUST00000206311 727 ntBASIC24.34■■□□□ 1.49
Trim41Q5NCC3 AC126253.1-201ENSMUST00000227974 824 ntBASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim41Q5NCC3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm11557-201ENSMUST00000120200 1008 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm8927-201ENSMUST00000181978 981 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 AC073947.1-201ENSMUST00000216991 649 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm45930-201ENSMUST00000221330 292 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Gm3222-201ENSMUST00000071282 990 ntBASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC24.33■■□□□ 1.49
Trim41Q5NCC3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim41Q5NCC3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim41Q5NCC3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
Trim41Q5NCC3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
Trim41Q5NCC3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim41Q5NCC3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trim41Q5NCC3 Gm6159-201ENSMUST00000191249 1724 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Gm11434-201ENSMUST00000122379 629 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Gm24420-201ENSMUST00000176676 59 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Gm7561-201ENSMUST00000211203 886 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Gm6091-201ENSMUST00000098307 165 ntBASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim41Q5NCC3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms