Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps13aQ5H8C4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Gm44551-201ENSMUST00000208804 171 ntBASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Gm18027-201ENSMUST00000218947 619 ntBASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps13aQ5H8C4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm11964-201ENSMUST00000120982 444 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm24830-201ENSMUST00000102024 166 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm25890-201ENSMUST00000177643 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm22614-201ENSMUST00000178300 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm22042-201ENSMUST00000082989 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm26232-201ENSMUST00000083360 166 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm24136-201ENSMUST00000083374 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm26110-201ENSMUST00000083971 165 ntBASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps13aQ5H8C4 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Gm14208-201ENSMUST00000119645 678 ntBASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms