Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp48Q3V0C5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp48Q3V0C5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Gm12134-201ENSMUST00000122109 520 ntBASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Gm45098-201ENSMUST00000207179 657 ntBASIC17.45■□□□□ 0.38
Usp48Q3V0C5 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp48Q3V0C5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Gm15678-201ENSMUST00000117573 960 ntBASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Gm12390-201ENSMUST00000117897 397 ntBASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp48Q3V0C5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp48Q3V0C5 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.43■□□□□ 0.38
Usp48Q3V0C5 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.43■□□□□ 0.38
Usp48Q3V0C5 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms