Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Gm15467-201ENSMUST00000120582 445 ntBASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Gm18041-201ENSMUST00000218210 618 ntBASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa3Q3UPR0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Gm5264-201ENSMUST00000190584 848 ntBASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa3Q3UPR0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms