Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upf3aQ3ULJ3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm7561-201ENSMUST00000211203 886 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.78□□□□□ -0.04
Upf3aQ3ULJ3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Upf3aQ3ULJ3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Upf3aQ3ULJ3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Upf3aQ3ULJ3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms