Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Gm28630-201ENSMUST00000187806 498 ntBASIC16.61■□□□□ 0.25
Limch1Q3UH68 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.61■□□□□ 0.25
Limch1Q3UH68 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.61■□□□□ 0.25
Limch1Q3UH68 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Limch1Q3UH68 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.61■□□□□ 0.25
Limch1Q3UH68 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Gm8584-201ENSMUST00000171982 758 ntBASIC16.6■□□□□ 0.25
Limch1Q3UH68 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.6■□□□□ 0.25
Limch1Q3UH68 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.6■□□□□ 0.25
Limch1Q3UH68 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Gm2423-201ENSMUST00000074863 733 ntBASIC16.6■□□□□ 0.25
Limch1Q3UH68 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.6■□□□□ 0.25
Limch1Q3UH68 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Limch1Q3UH68 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.59■□□□□ 0.25
Limch1Q3UH68 Gm12882-201ENSMUST00000121696 517 ntBASIC16.59■□□□□ 0.25
Limch1Q3UH68 Gm11424-201ENSMUST00000121929 829 ntBASIC16.59■□□□□ 0.25
Limch1Q3UH68 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Gm18766-201ENSMUST00000189811 808 ntBASIC16.59■□□□□ 0.25
Limch1Q3UH68 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.59■□□□□ 0.25
Limch1Q3UH68 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Limch1Q3UH68 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Limch1Q3UH68 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Limch1Q3UH68 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Limch1Q3UH68 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Limch1Q3UH68 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Limch1Q3UH68 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Limch1Q3UH68 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Limch1Q3UH68 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.58■□□□□ 0.24
Limch1Q3UH68 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Limch1Q3UH68 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms