Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Khdc4Q3TCX3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Gm9726-201ENSMUST00000180321 678 ntBASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Khdc4Q3TCX3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Gm46209-201ENSMUST00000217912 553 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Khdc4Q3TCX3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms