Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cul4aQ3TCH7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cul4aQ3TCH7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 AA619741-201ENSMUST00000195095 646 ntBASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Cul4aQ3TCH7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cul4aQ3TCH7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cul4aQ3TCH7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms