Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Q3KNL4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Q3KNL4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Q3KNL4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.86□□□□□ -0.19
Q3KNL4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Gm6973-201ENSMUST00000117080 721 ntBASIC13.86□□□□□ -0.19
Q3KNL4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.86□□□□□ -0.19
Q3KNL4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Q3KNL4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Q3KNL4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.86□□□□□ -0.19
Q3KNL4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.86□□□□□ -0.19
Q3KNL4 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.86□□□□□ -0.19
Q3KNL4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Q3KNL4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3KNL4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Q3KNL4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.85□□□□□ -0.19
Q3KNL4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 Gm10275-202ENSMUST00000168697 495 ntBASIC13.85□□□□□ -0.19
Q3KNL4 Mir3113-201ENSMUST00000175478 76 ntBASIC13.85□□□□□ -0.19
Q3KNL4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Q3KNL4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Q3KNL4 Gm10275-201ENSMUST00000092620 635 ntBASIC13.85□□□□□ -0.19
Q3KNL4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3KNL4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Q3KNL4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Q3KNL4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Q3KNL4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.84□□□□□ -0.19
Q3KNL4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3KNL4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Q3KNL4 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms