Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm18204-201ENSMUST00000209835 793 ntBASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ush2AQ2QI47 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm45495-201ENSMUST00000200940 1700 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm13859-201ENSMUST00000119936 1423 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Mir7076-201ENSMUST00000183519 74 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm44329-201ENSMUST00000197469 112 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm45120-201ENSMUST00000208880 408 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 AC168058.1-201ENSMUST00000219521 2282 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm12266-201ENSMUST00000120311 962 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm7211-201ENSMUST00000172692 1118 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rn7sk-201ENSMUST00000083103 331 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Gm26315-201ENSMUST00000083890 321 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 AC114543.1-201ENSMUST00000226451 1558 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 CT009713.8-202ENSMUST00000224732 385 ntBASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ush2AQ2QI47 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Ush2AQ2QI47 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Ush2AQ2QI47 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm5112-201ENSMUST00000204407 2368 ntBASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm14274-201ENSMUST00000117182 615 ntBASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC7.27□□□□□ -1.25
Ush2AQ2QI47 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Mir219a-1-201ENSMUST00000083621 110 ntBASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm10313-201ENSMUST00000095320 1002 ntBASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm9136-201ENSMUST00000193368 454 ntBASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ush2AQ2QI47 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms