Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna5Q2MKA5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Gm7584-201ENSMUST00000175829 940 ntBASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna5Q2MKA5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Gm6152-201ENSMUST00000151704 340 ntBASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.65■□□□□ 0.26
Chrna5Q2MKA5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Chrna5Q2MKA5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm12203-201ENSMUST00000118235 598 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm12209-201ENSMUST00000120089 596 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm38002-201ENSMUST00000193255 180 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm42550-201ENSMUST00000201553 960 ntBASIC16.64■□□□□ 0.25
Chrna5Q2MKA5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms