Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col19a1Q0VF58 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Mir5120-201ENSMUST00000175020 78 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Mir7032-201ENSMUST00000185154 79 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 AU022133-201ENSMUST00000200601 873 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col19a1Q0VF58 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Gm37922-201ENSMUST00000195596 455 ntBASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Gm7046-201ENSMUST00000221351 977 ntBASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col19a1Q0VF58 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col19a1Q0VF58 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms