Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Smn1P97801 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.1□□□□□ -0.47
Smn1P97801 Gm2272-201ENSMUST00000194903 582 ntBASIC12.1□□□□□ -0.47
Smn1P97801 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.1□□□□□ -0.47
Smn1P97801 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.1□□□□□ -0.47
Smn1P97801 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.1□□□□□ -0.47
Smn1P97801 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Smn1P97801 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smn1P97801 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smn1P97801 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smn1P97801 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smn1P97801 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smn1P97801 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.09□□□□□ -0.47
Smn1P97801 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smn1P97801 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smn1P97801 Gm15590-201ENSMUST00000078419 552 ntBASIC12.09□□□□□ -0.47
Smn1P97801 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.09□□□□□ -0.47
Smn1P97801 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.09□□□□□ -0.47
Smn1P97801 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.09□□□□□ -0.47
Smn1P97801 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Smn1P97801 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smn1P97801 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.09□□□□□ -0.47
Smn1P97801 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.08□□□□□ -0.47
Smn1P97801 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Smn1P97801 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Smn1P97801 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Smn1P97801 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Gm9103-201ENSMUST00000119371 405 ntBASIC12.08□□□□□ -0.48
Smn1P97801 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.08□□□□□ -0.48
Smn1P97801 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.08□□□□□ -0.48
Smn1P97801 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.08□□□□□ -0.48
Smn1P97801 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.08□□□□□ -0.48
Smn1P97801 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smn1P97801 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms