Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Thumpd3P97770 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Thumpd3P97770 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd3P97770 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd3P97770 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.37□□□□□ -0.11
Thumpd3P97770 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.37□□□□□ -0.11
Thumpd3P97770 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Thumpd3P97770 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd3P97770 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.36□□□□□ -0.11
Thumpd3P97770 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.36□□□□□ -0.11
Thumpd3P97770 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm13365-201ENSMUST00000121188 973 ntBASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm11745-201ENSMUST00000121669 448 ntBASIC14.36□□□□□ -0.11
Thumpd3P97770 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Gm45612-201ENSMUST00000211320 160 ntBASIC14.36□□□□□ -0.11
Thumpd3P97770 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd3P97770 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd3P97770 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Gm14042-201ENSMUST00000120139 833 ntBASIC14.35□□□□□ -0.11
Thumpd3P97770 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd3P97770 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.35□□□□□ -0.11
Thumpd3P97770 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.35□□□□□ -0.11
Thumpd3P97770 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.35□□□□□ -0.11
Thumpd3P97770 Gm44335-201ENSMUST00000196879 141 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms