Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.61■□□□□ 0.41
Nkx2-3P97334 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.6■□□□□ 0.41
Nkx2-3P97334 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.6■□□□□ 0.41
Nkx2-3P97334 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-3P97334 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.59■□□□□ 0.41
Nkx2-3P97334 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gm5187-201ENSMUST00000117317 991 ntBASIC17.59■□□□□ 0.41
Nkx2-3P97334 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gm22331-201ENSMUST00000158066 136 ntBASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.59■□□□□ 0.41
Nkx2-3P97334 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-3P97334 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-3P97334 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Sybu-209ENSMUST00000228639 4113 ntBASIC17.58■□□□□ 0.41
Nkx2-3P97334 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.58■□□□□ 0.41
Nkx2-3P97334 Gm24644-201ENSMUST00000157114 139 ntBASIC17.58■□□□□ 0.4
Nkx2-3P97334 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Gm10478-201ENSMUST00000084451 396 ntBASIC17.58■□□□□ 0.4
Nkx2-3P97334 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx2-3P97334 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms