Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Mir497b-201ENSMUST00000093601 125 ntBASIC9.38□□□□□ -0.91
PrkdcP97313 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.38□□□□□ -0.91
PrkdcP97313 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
PrkdcP97313 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
PrkdcP97313 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PrkdcP97313 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.38□□□□□ -0.91
PrkdcP97313 Gm13047-201ENSMUST00000117116 815 ntBASIC9.38□□□□□ -0.91
PrkdcP97313 Gm11637-201ENSMUST00000120601 592 ntBASIC9.38□□□□□ -0.91
PrkdcP97313 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PrkdcP97313 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.38□□□□□ -0.91
PrkdcP97313 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
PrkdcP97313 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm37042-201ENSMUST00000193816 581 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
PrkdcP97313 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.37□□□□□ -0.91
PrkdcP97313 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
PrkdcP97313 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.37□□□□□ -0.91
PrkdcP97313 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
PrkdcP97313 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PrkdcP97313 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 Gm8712-201ENSMUST00000221090 701 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PrkdcP97313 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.37□□□□□ -0.91
PrkdcP97313 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm14109-201ENSMUST00000118814 309 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm7666-201ENSMUST00000146631 819 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
PrkdcP97313 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Mir6546-201ENSMUST00000184460 62 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm38210-201ENSMUST00000191944 809 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm37666-201ENSMUST00000194110 866 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm44069-201ENSMUST00000204898 506 ntBASIC9.36□□□□□ -0.91
PrkdcP97313 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PrkdcP97313 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PrkdcP97313 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms