Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim43bP86448 Gm14701-201ENSMUST00000117156 348 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 Gm14042-201ENSMUST00000120139 833 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim43bP86448 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim43bP86448 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim43bP86448 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trim43bP86448 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim43bP86448 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim43bP86448 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trim43bP86448 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43bP86448 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.52□□□□□ -0.09
Trim43bP86448 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Trim43bP86448 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.51□□□□□ -0.09
Trim43bP86448 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm25925-201ENSMUST00000158314 306 ntBASIC14.51□□□□□ -0.09
Trim43bP86448 Gm16026-204ENSMUST00000162652 683 ntBASIC14.51□□□□□ -0.09
Trim43bP86448 Gm5312-201ENSMUST00000203728 547 ntBASIC14.51□□□□□ -0.09
Trim43bP86448 Gm18057-201ENSMUST00000208220 503 ntBASIC14.51□□□□□ -0.09
Trim43bP86448 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.51□□□□□ -0.09
Trim43bP86448 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim43bP86448 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim43bP86448 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43bP86448 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim43bP86448 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trim43bP86448 Gm13464-201ENSMUST00000119418 935 ntBASIC14.5□□□□□ -0.09
Trim43bP86448 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.5□□□□□ -0.09
Trim43bP86448 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.5□□□□□ -0.09
Trim43bP86448 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.5□□□□□ -0.09
Trim43bP86448 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim43bP86448 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim43bP86448 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim43bP86448 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim43bP86448 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms