Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm44344-201ENSMUST00000200287 129 ntBASIC12.57□□□□□ -0.4
H3f3aP84244 Gm6916-202ENSMUST00000205523 195 ntBASIC12.57□□□□□ -0.4
H3f3aP84244 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.57□□□□□ -0.4
H3f3aP84244 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
H3f3aP84244 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.57□□□□□ -0.4
H3f3aP84244 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.57□□□□□ -0.4
H3f3aP84244 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.57□□□□□ -0.4
H3f3aP84244 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.57□□□□□ -0.4
H3f3aP84244 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
H3f3aP84244 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.57□□□□□ -0.4
H3f3aP84244 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H3f3aP84244 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.56□□□□□ -0.4
H3f3aP84244 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
H3f3aP84244 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.56□□□□□ -0.4
H3f3aP84244 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.56□□□□□ -0.4
H3f3aP84244 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.56□□□□□ -0.4
H3f3aP84244 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.56□□□□□ -0.4
H3f3aP84244 Gm9063-201ENSMUST00000223299 582 ntBASIC12.56□□□□□ -0.4
H3f3aP84244 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.56□□□□□ -0.4
H3f3aP84244 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.56□□□□□ -0.4
H3f3aP84244 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
H3f3aP84244 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H3f3aP84244 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
H3f3aP84244 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
H3f3aP84244 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
H3f3aP84244 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
H3f3aP84244 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.55□□□□□ -0.4
H3f3aP84244 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.55□□□□□ -0.4
H3f3aP84244 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.55□□□□□ -0.4
H3f3aP84244 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.55□□□□□ -0.4
H3f3aP84244 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.55□□□□□ -0.4
H3f3aP84244 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
H3f3aP84244 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Gm46209-201ENSMUST00000217912 553 ntBASIC12.55□□□□□ -0.4
H3f3aP84244 Gm9229-201ENSMUST00000222777 126 ntBASIC12.55□□□□□ -0.4
H3f3aP84244 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H3f3aP84244 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms