Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Gm7284-201ENSMUST00000131667 944 ntBASIC11.83□□□□□ -0.52
SgcaP82350 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.83□□□□□ -0.52
SgcaP82350 Gm33142-201ENSMUST00000193913 867 ntBASIC11.83□□□□□ -0.52
SgcaP82350 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
SgcaP82350 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.83□□□□□ -0.52
SgcaP82350 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SgcaP82350 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.83□□□□□ -0.52
SgcaP82350 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SgcaP82350 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.82□□□□□ -0.52
SgcaP82350 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.82□□□□□ -0.52
SgcaP82350 Gm8749-201ENSMUST00000117737 331 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Gm14859-201ENSMUST00000117752 357 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Gm14042-201ENSMUST00000120139 833 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SgcaP82350 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Gm9682-201ENSMUST00000197505 556 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.82□□□□□ -0.52
SgcaP82350 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SgcaP82350 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.82□□□□□ -0.52
SgcaP82350 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
SgcaP82350 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SgcaP82350 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SgcaP82350 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.81□□□□□ -0.52
SgcaP82350 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SgcaP82350 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms