Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.32■□□□□ 0.04
Frat1P70339 Gm12644-201ENSMUST00000119935 606 ntBASIC15.32■□□□□ 0.04
Frat1P70339 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
Frat1P70339 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.32■□□□□ 0.04
Frat1P70339 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Frat1P70339 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Frat1P70339 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Frat1P70339 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.31■□□□□ 0.04
Frat1P70339 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Frat1P70339 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Frat1P70339 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Frat1P70339 AA414768-201ENSMUST00000121924 1257 ntBASIC15.3■□□□□ 0.04
Frat1P70339 Gm12895-201ENSMUST00000122214 226 ntBASIC15.3■□□□□ 0.04
Frat1P70339 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.3■□□□□ 0.04
Frat1P70339 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.3■□□□□ 0.04
Frat1P70339 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.3■□□□□ 0.04
Frat1P70339 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.3■□□□□ 0.04
Frat1P70339 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.3■□□□□ 0.04
Frat1P70339 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.3■□□□□ 0.04
Frat1P70339 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Frat1P70339 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Frat1P70339 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.29■□□□□ 0.04
Frat1P70339 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.29■□□□□ 0.04
Frat1P70339 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Frat1P70339 Gm4535-201ENSMUST00000182274 558 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Gm37230-201ENSMUST00000194491 818 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Frat1P70339 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Gm10355-201ENSMUST00000097146 517 ntBASIC15.29■□□□□ 0.04
Frat1P70339 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Frat1P70339 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms