Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.29□□□□□ -0.44
Uba52P62984 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.29□□□□□ -0.44
Uba52P62984 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Uba52P62984 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Uba52P62984 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Uba52P62984 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Uba52P62984 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.28□□□□□ -0.44
Uba52P62984 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Gm13616-201ENSMUST00000120600 222 ntBASIC12.28□□□□□ -0.44
Uba52P62984 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.28□□□□□ -0.44
Uba52P62984 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.28□□□□□ -0.44
Uba52P62984 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.28□□□□□ -0.44
Uba52P62984 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.28□□□□□ -0.44
Uba52P62984 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Uba52P62984 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.28□□□□□ -0.44
Uba52P62984 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Uba52P62984 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.28□□□□□ -0.44
Uba52P62984 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.28□□□□□ -0.44
Uba52P62984 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Uba52P62984 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Uba52P62984 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Uba52P62984 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Uba52P62984 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.27□□□□□ -0.45
Uba52P62984 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.27□□□□□ -0.45
Uba52P62984 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.27□□□□□ -0.45
Uba52P62984 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.27□□□□□ -0.45
Uba52P62984 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.27□□□□□ -0.45
Uba52P62984 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.27□□□□□ -0.45
Uba52P62984 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.27□□□□□ -0.45
Uba52P62984 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Uba52P62984 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.27□□□□□ -0.45
Uba52P62984 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Uba52P62984 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.26□□□□□ -0.45
Uba52P62984 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.26□□□□□ -0.45
Uba52P62984 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Uba52P62984 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Uba52P62984 Gm15427-201ENSMUST00000117288 531 ntBASIC12.26□□□□□ -0.45
Uba52P62984 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Uba52P62984 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.26□□□□□ -0.45
Uba52P62984 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.26□□□□□ -0.45
Uba52P62984 Gm27301-201ENSMUST00000184012 127 ntBASIC12.26□□□□□ -0.45
Uba52P62984 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms