Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cks1bP61025 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cks1bP61025 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Cks1bP61025 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cks1bP61025 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.09□□□□□ -0.79
Cks1bP61025 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.09□□□□□ -0.79
Cks1bP61025 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.09□□□□□ -0.79
Cks1bP61025 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.09□□□□□ -0.79
Cks1bP61025 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Gm8655-201ENSMUST00000221159 852 ntBASIC10.09□□□□□ -0.79
Cks1bP61025 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cks1bP61025 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cks1bP61025 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Cks1bP61025 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Cks1bP61025 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.08□□□□□ -0.8
Cks1bP61025 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.08□□□□□ -0.8
Cks1bP61025 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.08□□□□□ -0.8
Cks1bP61025 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cks1bP61025 AA414768-201ENSMUST00000121924 1257 ntBASIC10.08□□□□□ -0.8
Cks1bP61025 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.08□□□□□ -0.8
Cks1bP61025 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.08□□□□□ -0.8
Cks1bP61025 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Cks1bP61025 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.08□□□□□ -0.8
Cks1bP61025 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Cks1bP61025 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Cks1bP61025 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cks1bP61025 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Cks1bP61025 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Cks1bP61025 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cks1bP61025 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.07□□□□□ -0.8
Cks1bP61025 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms