Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Tpm1P58771 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tpm1P58771 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.75■□□□□ 0.11
Tpm1P58771 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.75■□□□□ 0.11
Tpm1P58771 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.75■□□□□ 0.11
Tpm1P58771 AV026068-213ENSMUST00000223675 1171 ntBASIC15.75■□□□□ 0.11
Tpm1P58771 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.75■□□□□ 0.11
Tpm1P58771 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.75■□□□□ 0.11
Tpm1P58771 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Tpm1P58771 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.75■□□□□ 0.11
Tpm1P58771 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tpm1P58771 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Tpm1P58771 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Tpm1P58771 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.74■□□□□ 0.11
Tpm1P58771 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Gm8584-201ENSMUST00000171982 758 ntBASIC15.74■□□□□ 0.11
Tpm1P58771 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Tpm1P58771 Gm2272-201ENSMUST00000194903 582 ntBASIC15.74■□□□□ 0.11
Tpm1P58771 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.74■□□□□ 0.11
Tpm1P58771 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Tpm1P58771 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.74■□□□□ 0.11
Tpm1P58771 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Tpm1P58771 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.74■□□□□ 0.11
Tpm1P58771 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tpm1P58771 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tpm1P58771 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Tpm1P58771 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Tpm1P58771 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Tpm1P58771 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.73■□□□□ 0.11
Tpm1P58771 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Gm18041-201ENSMUST00000218210 618 ntBASIC15.73■□□□□ 0.11
Tpm1P58771 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tpm1P58771 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.73■□□□□ 0.11
Tpm1P58771 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.73■□□□□ 0.11
Tpm1P58771 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tpm1P58771 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Tpm1P58771 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tpm1P58771 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms