Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Mmp20P57748 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp20P57748 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.05■□□□□ 0.16
Mmp20P57748 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.05■□□□□ 0.16
Mmp20P57748 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Mmp20P57748 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp20P57748 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Gm12384-201ENSMUST00000119228 919 ntBASIC16.05■□□□□ 0.16
Mmp20P57748 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.05■□□□□ 0.16
Mmp20P57748 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.05■□□□□ 0.16
Mmp20P57748 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp20P57748 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.05■□□□□ 0.16
Mmp20P57748 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp20P57748 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.05■□□□□ 0.16
Mmp20P57748 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.05■□□□□ 0.16
Mmp20P57748 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Mmp20P57748 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp20P57748 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp20P57748 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.04■□□□□ 0.16
Mmp20P57748 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.04■□□□□ 0.16
Mmp20P57748 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Mmp20P57748 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Mmp20P57748 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.04■□□□□ 0.16
Mmp20P57748 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp20P57748 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Mmp20P57748 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Gm27572-201ENSMUST00000183702 255 ntBASIC16.04■□□□□ 0.16
Mmp20P57748 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp20P57748 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Mmp20P57748 Olfr582-201ENSMUST00000098212 960 ntBASIC16.04■□□□□ 0.16
Mmp20P57748 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp20P57748 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Mmp20P57748 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp20P57748 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Mmp20P57748 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.03■□□□□ 0.16
Mmp20P57748 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Mmp20P57748 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Mmp20P57748 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Gm23931-201ENSMUST00000103842 109 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Gm22331-201ENSMUST00000158066 136 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Mmp20P57748 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Mmp20P57748 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.03■□□□□ 0.16
Mmp20P57748 Gm43818-201ENSMUST00000200605 466 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.03■□□□□ 0.16
Mmp20P57748 Gm18473-201ENSMUST00000220543 868 ntBASIC16.03■□□□□ 0.16
Mmp20P57748 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp20P57748 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms