Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.13□□□□□ -0.63
Rab4aP56371 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rab4aP56371 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.13□□□□□ -0.63
Rab4aP56371 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rab4aP56371 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rab4aP56371 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rab4aP56371 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Rab4aP56371 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.12□□□□□ -0.63
Rab4aP56371 Gm30025-201ENSMUST00000218555 728 ntBASIC11.12□□□□□ -0.63
Rab4aP56371 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.12□□□□□ -0.63
Rab4aP56371 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rab4aP56371 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.12□□□□□ -0.63
Rab4aP56371 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rab4aP56371 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rab4aP56371 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Gm10653-202ENSMUST00000139570 835 ntBASIC11.11□□□□□ -0.63
Rab4aP56371 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.11□□□□□ -0.63
Rab4aP56371 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
Rab4aP56371 Gm5417-201ENSMUST00000079706 384 ntBASIC11.11□□□□□ -0.63
Rab4aP56371 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.11□□□□□ -0.63
Rab4aP56371 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.11□□□□□ -0.63
Rab4aP56371 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rab4aP56371 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rab4aP56371 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Rab4aP56371 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rab4aP56371 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.1□□□□□ -0.63
Rab4aP56371 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.1□□□□□ -0.63
Rab4aP56371 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.1□□□□□ -0.63
Rab4aP56371 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rab4aP56371 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms