Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.41□□□□□ -0.1
ClgnP52194 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ClgnP52194 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClgnP52194 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ClgnP52194 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.4□□□□□ -0.1
ClgnP52194 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ClgnP52194 Gm38225-201ENSMUST00000194001 393 ntBASIC14.4□□□□□ -0.1
ClgnP52194 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.4□□□□□ -0.1
ClgnP52194 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.4□□□□□ -0.1
ClgnP52194 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ClgnP52194 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClgnP52194 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.39□□□□□ -0.11
ClgnP52194 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ClgnP52194 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
ClgnP52194 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.39□□□□□ -0.11
ClgnP52194 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.39□□□□□ -0.11
ClgnP52194 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.39□□□□□ -0.11
ClgnP52194 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.39□□□□□ -0.11
ClgnP52194 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.39□□□□□ -0.11
ClgnP52194 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.39□□□□□ -0.11
ClgnP52194 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ClgnP52194 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ClgnP52194 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ClgnP52194 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClgnP52194 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.38□□□□□ -0.11
ClgnP52194 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.38□□□□□ -0.11
ClgnP52194 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ClgnP52194 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.38□□□□□ -0.11
ClgnP52194 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClgnP52194 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ClgnP52194 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms