Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.76□□□□□ -0.37
Rfx3P48381 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfx3P48381 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rfx3P48381 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rfx3P48381 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rfx3P48381 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.75□□□□□ -0.37
Rfx3P48381 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rfx3P48381 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rfx3P48381 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.75□□□□□ -0.37
Rfx3P48381 Gm11779-201ENSMUST00000118541 368 ntBASIC12.75□□□□□ -0.37
Rfx3P48381 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rfx3P48381 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Rfx3P48381 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.75□□□□□ -0.37
Rfx3P48381 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rfx3P48381 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.75□□□□□ -0.37
Rfx3P48381 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.75□□□□□ -0.37
Rfx3P48381 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rfx3P48381 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rfx3P48381 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.75□□□□□ -0.37
Rfx3P48381 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rfx3P48381 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfx3P48381 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.74□□□□□ -0.37
Rfx3P48381 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.74□□□□□ -0.37
Rfx3P48381 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.74□□□□□ -0.37
Rfx3P48381 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.74□□□□□ -0.37
Rfx3P48381 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.74□□□□□ -0.37
Rfx3P48381 Gm5264-201ENSMUST00000190584 848 ntBASIC12.74□□□□□ -0.37
Rfx3P48381 Gm2756-201ENSMUST00000195851 400 ntBASIC12.74□□□□□ -0.37
Rfx3P48381 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rfx3P48381 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfx3P48381 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.74□□□□□ -0.37
Rfx3P48381 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.74□□□□□ -0.37
Rfx3P48381 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rfx3P48381 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms