Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox18P43680 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sox18P43680 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Gm26461-201ENSMUST00000175064 290 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Gm8652-201ENSMUST00000181363 964 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Gm38241-201ENSMUST00000192641 898 ntBASIC13.54□□□□□ -0.24
Sox18P43680 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Gm7287-201ENSMUST00000205267 602 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox18P43680 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Gm6013-201ENSMUST00000212264 699 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Sox18P43680 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.54□□□□□ -0.24
Sox18P43680 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.54□□□□□ -0.24
Sox18P43680 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox18P43680 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox18P43680 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox18P43680 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sox18P43680 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox18P43680 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.53□□□□□ -0.24
Sox18P43680 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sox18P43680 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox18P43680 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Gm5370-201ENSMUST00000187187 574 ntBASIC13.53□□□□□ -0.24
Sox18P43680 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Gm9182-201ENSMUST00000217829 639 ntBASIC13.53□□□□□ -0.24
Sox18P43680 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox18P43680 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox18P43680 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.53□□□□□ -0.24
Sox18P43680 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox18P43680 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox18P43680 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox18P43680 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox18P43680 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox18P43680 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox18P43680 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox18P43680 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Sox18P43680 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox18P43680 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox18P43680 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox18P43680 Gm5187-201ENSMUST00000117317 991 ntBASIC13.52□□□□□ -0.25
Sox18P43680 Gm14723-201ENSMUST00000118686 215 ntBASIC13.52□□□□□ -0.25
Sox18P43680 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms