Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Sdc2P43407 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.83■□□□□ 0.13
Sdc2P43407 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sdc2P43407 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.83■□□□□ 0.13
Sdc2P43407 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.83■□□□□ 0.12
Sdc2P43407 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.83■□□□□ 0.12
Sdc2P43407 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sdc2P43407 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.83■□□□□ 0.12
Sdc2P43407 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.83■□□□□ 0.12
Sdc2P43407 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.83■□□□□ 0.12
Sdc2P43407 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.83■□□□□ 0.12
Sdc2P43407 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.83■□□□□ 0.12
Sdc2P43407 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sdc2P43407 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sdc2P43407 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.82■□□□□ 0.12
Sdc2P43407 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sdc2P43407 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sdc2P43407 Gm2810-201ENSMUST00000118681 990 ntBASIC15.82■□□□□ 0.12
Sdc2P43407 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.82■□□□□ 0.12
Sdc2P43407 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.82■□□□□ 0.12
Sdc2P43407 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.82■□□□□ 0.12
Sdc2P43407 Gm45612-201ENSMUST00000211320 160 ntBASIC15.82■□□□□ 0.12
Sdc2P43407 Gm10175-201ENSMUST00000086013 645 ntBASIC15.82■□□□□ 0.12
Sdc2P43407 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.82■□□□□ 0.12
Sdc2P43407 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Sdc2P43407 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.82■□□□□ 0.12
Sdc2P43407 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.82■□□□□ 0.12
Sdc2P43407 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sdc2P43407 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.81■□□□□ 0.12
Sdc2P43407 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.81■□□□□ 0.12
Sdc2P43407 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sdc2P43407 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sdc2P43407 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.8■□□□□ 0.12
Sdc2P43407 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sdc2P43407 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sdc2P43407 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.8■□□□□ 0.12
Sdc2P43407 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.8■□□□□ 0.12
Sdc2P43407 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sdc2P43407 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.8■□□□□ 0.12
Sdc2P43407 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.8■□□□□ 0.12
Sdc2P43407 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Gm38225-201ENSMUST00000194001 393 ntBASIC15.8■□□□□ 0.12
Sdc2P43407 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.8■□□□□ 0.12
Sdc2P43407 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Sdc2P43407 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.8■□□□□ 0.12
Sdc2P43407 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sdc2P43407 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms