Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm46209-201ENSMUST00000217912 553 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm9229-201ENSMUST00000222777 126 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Gm5867-201ENSMUST00000063197 592 ntBASIC12.94□□□□□ -0.34
Nkx2-2P42586 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-2P42586 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.93□□□□□ -0.34
Nkx2-2P42586 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gm27680-201ENSMUST00000184192 160 ntBASIC12.93□□□□□ -0.34
Nkx2-2P42586 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gm38294-201ENSMUST00000192831 381 ntBASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gm6888-201ENSMUST00000221983 706 ntBASIC12.93□□□□□ -0.34
Nkx2-2P42586 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-2P42586 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Gm15460-201ENSMUST00000118147 391 ntBASIC12.92□□□□□ -0.34
Nkx2-2P42586 Gm14767-201ENSMUST00000121559 586 ntBASIC12.92□□□□□ -0.34
Nkx2-2P42586 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Gm44344-201ENSMUST00000200287 129 ntBASIC12.92□□□□□ -0.34
Nkx2-2P42586 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-2P42586 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-2P42586 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms