Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Timp3P39876 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Timp3P39876 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Timp3P39876 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Timp3P39876 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.59□□□□□ -0.55
Timp3P39876 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.59□□□□□ -0.55
Timp3P39876 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Gm15653-201ENSMUST00000119247 907 ntBASIC11.59□□□□□ -0.55
Timp3P39876 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Gm5866-201ENSMUST00000177881 973 ntBASIC11.59□□□□□ -0.55
Timp3P39876 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.59□□□□□ -0.55
Timp3P39876 Gm2451-201ENSMUST00000199447 999 ntBASIC11.59□□□□□ -0.55
Timp3P39876 Gm10290-201ENSMUST00000200451 999 ntBASIC11.59□□□□□ -0.55
Timp3P39876 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.59□□□□□ -0.55
Timp3P39876 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.59□□□□□ -0.55
Timp3P39876 Gm9063-201ENSMUST00000223299 582 ntBASIC11.59□□□□□ -0.55
Timp3P39876 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.59□□□□□ -0.55
Timp3P39876 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.59□□□□□ -0.55
Timp3P39876 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Timp3P39876 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Timp3P39876 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.58□□□□□ -0.56
Timp3P39876 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.58□□□□□ -0.56
Timp3P39876 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.58□□□□□ -0.56
Timp3P39876 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Timp3P39876 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Timp3P39876 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.58□□□□□ -0.56
Timp3P39876 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Timp3P39876 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Timp3P39876 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Timp3P39876 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Timp3P39876 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.57□□□□□ -0.56
Timp3P39876 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Timp3P39876 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Timp3P39876 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms