Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nedd8P29595 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nedd8P29595 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nedd8P29595 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nedd8P29595 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nedd8P29595 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nedd8P29595 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nedd8P29595 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nedd8P29595 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nedd8P29595 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nedd8P29595 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nedd8P29595 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.02□□□□□ -0.33
Nedd8P29595 Gm13464-201ENSMUST00000119418 935 ntBASIC13.02□□□□□ -0.33
Nedd8P29595 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Gm6345-202ENSMUST00000180900 204 ntBASIC13.02□□□□□ -0.33
Nedd8P29595 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.02□□□□□ -0.33
Nedd8P29595 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nedd8P29595 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nedd8P29595 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.02□□□□□ -0.33
Nedd8P29595 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nedd8P29595 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Gm15165-201ENSMUST00000118140 502 ntBASIC13.01□□□□□ -0.33
Nedd8P29595 Gm11950-201ENSMUST00000121615 838 ntBASIC13.01□□□□□ -0.33
Nedd8P29595 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.01□□□□□ -0.33
Nedd8P29595 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.01□□□□□ -0.33
Nedd8P29595 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nedd8P29595 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nedd8P29595 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Nedd8P29595 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13□□□□□ -0.33
Nedd8P29595 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Ssr1-203ENSMUST00000225246 1825 ntBASIC13□□□□□ -0.33
Nedd8P29595 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 AL672049.1-201ENSMUST00000197943 91 ntBASIC13□□□□□ -0.33
Nedd8P29595 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13□□□□□ -0.33
Nedd8P29595 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nedd8P29595 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13□□□□□ -0.33
Nedd8P29595 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms