Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.66■□□□□ 0.1
Gjb1P28230 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Gm11803-201ENSMUST00000119966 444 ntBASIC15.66■□□□□ 0.1
Gjb1P28230 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gjb1P28230 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.66■□□□□ 0.1
Gjb1P28230 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gjb1P28230 Gm37008-201ENSMUST00000195712 319 ntBASIC15.66■□□□□ 0.1
Gjb1P28230 Gm43118-201ENSMUST00000199149 775 ntBASIC15.66■□□□□ 0.1
Gjb1P28230 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.66■□□□□ 0.1
Gjb1P28230 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.66■□□□□ 0.1
Gjb1P28230 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gjb1P28230 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gjb1P28230 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.65■□□□□ 0.1
Gjb1P28230 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.65■□□□□ 0.1
Gjb1P28230 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gjb1P28230 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Gjb1P28230 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.65■□□□□ 0.1
Gjb1P28230 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gjb1P28230 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gjb1P28230 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gjb1P28230 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Gjb1P28230 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.65■□□□□ 0.1
Gjb1P28230 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gjb1P28230 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.65■□□□□ 0.1
Gjb1P28230 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Gjb1P28230 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.64■□□□□ 0.09
Gjb1P28230 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gjb1P28230 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gjb1P28230 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gjb1P28230 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Gjb1P28230 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.64■□□□□ 0.09
Gjb1P28230 Gm38341-201ENSMUST00000195357 515 ntBASIC15.64■□□□□ 0.09
Gjb1P28230 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.64■□□□□ 0.09
Gjb1P28230 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.64■□□□□ 0.09
Gjb1P28230 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gjb1P28230 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gjb1P28230 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.63■□□□□ 0.09
Gjb1P28230 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gjb1P28230 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gjb1P28230 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms