Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.02□□□□□ -0.65
Ccl6P27784 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccl6P27784 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccl6P27784 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccl6P27784 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ccl6P27784 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccl6P27784 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccl6P27784 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl6P27784 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Ccl6P27784 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Ccl6P27784 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.01□□□□□ -0.65
Ccl6P27784 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccl6P27784 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccl6P27784 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl6P27784 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccl6P27784 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Ccl6P27784 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccl6P27784 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11□□□□□ -0.65
Ccl6P27784 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11□□□□□ -0.65
Ccl6P27784 Gm43125-201ENSMUST00000201724 730 ntBASIC11□□□□□ -0.65
Ccl6P27784 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 AC158529.1-201ENSMUST00000223618 239 ntBASIC11□□□□□ -0.65
Ccl6P27784 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11□□□□□ -0.65
Ccl6P27784 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Ccl6P27784 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccl6P27784 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl6P27784 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl6P27784 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.99□□□□□ -0.65
Ccl6P27784 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms