Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.54□□□□□ -0.24
BdnfP21237 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
BdnfP21237 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
BdnfP21237 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
BdnfP21237 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.53□□□□□ -0.24
BdnfP21237 Gm9727-201ENSMUST00000161387 555 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Gm9182-201ENSMUST00000217829 639 ntBASIC13.53□□□□□ -0.24
BdnfP21237 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
BdnfP21237 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.53□□□□□ -0.24
BdnfP21237 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
BdnfP21237 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
BdnfP21237 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
BdnfP21237 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.52□□□□□ -0.24
BdnfP21237 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
BdnfP21237 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.52□□□□□ -0.24
BdnfP21237 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
BdnfP21237 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
BdnfP21237 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.52□□□□□ -0.25
BdnfP21237 Gm12260-201ENSMUST00000122447 411 ntBASIC13.52□□□□□ -0.25
BdnfP21237 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Gm45098-201ENSMUST00000207179 657 ntBASIC13.52□□□□□ -0.25
BdnfP21237 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.52□□□□□ -0.25
BdnfP21237 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
BdnfP21237 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BdnfP21237 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
BdnfP21237 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.51□□□□□ -0.25
BdnfP21237 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BdnfP21237 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.51□□□□□ -0.25
BdnfP21237 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms