Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hoxc9P09633 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hoxc9P09633 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hoxc9P09633 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Hoxc9P09633 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hoxc9P09633 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.14■□□□□ 0.49
Hoxc9P09633 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hoxc9P09633 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Hoxc9P09633 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Gm42550-201ENSMUST00000201553 960 ntBASIC18.14■□□□□ 0.49
Hoxc9P09633 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.14■□□□□ 0.49
Hoxc9P09633 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Gm10605-202ENSMUST00000183019 3198 ntBASIC18.14■□□□□ 0.49
Hoxc9P09633 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.14■□□□□ 0.49
Hoxc9P09633 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hoxc9P09633 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Hoxc9P09633 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm6152-201ENSMUST00000151704 340 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm22331-201ENSMUST00000158066 136 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm8810-201ENSMUST00000172895 754 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Hoxc9P09633 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hoxc9P09633 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Hoxc9P09633 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Hoxc9P09633 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.12■□□□□ 0.49
Hoxc9P09633 Gm16177-201ENSMUST00000120728 718 ntBASIC18.12■□□□□ 0.49
Hoxc9P09633 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.12■□□□□ 0.49
Hoxc9P09633 Gm40466-201ENSMUST00000212174 422 ntBASIC18.12■□□□□ 0.49
Hoxc9P09633 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.12■□□□□ 0.49
Hoxc9P09633 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hoxc9P09633 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hoxc9P09633 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hoxc9P09633 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms